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Publications

2017

  1. Live imaging reveals the dynamics and regulation of mitochondrial nucleoids during the cell cycle in Fucci2-HeLa cells
    Taeko Sasaki, Yoshikatsu Sato, Tetsuya Higashiyama & Narie Sasaki
    Sci. Rep. 7, 11257 (2017)
    DOI: 10.1038/s41598-017-10843-8

  2. Dynamic plasticity in phototransduction regulates seasonal changes in color perception
    Tsuyoshi Shimmura, Tomoya Nakayama, Ai Shinomiya, Shoji Fukamachi, Masaki Yasugi, Eiji Watanabe, Takayuki Shimo, Takumi Senga, Toshiya Nishimura, Minoru Tanaka, Yasuhiro Kamei, Kiyoshi Naruse & Takashi Yoshimura
    Nature Commun. 8, 412 (2017)
    DOI: 10.1038/s41467-017-00432-8

  3. Laterally π-Extended Dithia[6]helicenes with Heptagons: Saddle-Helix Hybrid Molecules
    Takao Fujikawa, Yasutomo Segawa, and Kenichiro Itami
    J. Org. Chem. 82, 7745–7749 (2017)
    DOI: 10.1021/acs.joc.7b01540

  4. Synthesis of seminaphtho-phospha-fluorescein dyes based on the consecutive arylation of aryldichlorophosphines
    Aiko Fukazawa, Junichi Usuba, Raul A. Adler and Shigehiro Yamaguchi
    Chem. Commun. 53, 8565-8568 (2017)
    DOI: 10.1039/c7cc04323f

  5. Pd-Catalyzed Desulfonative Cross-Coupling of Benzylic Sulfone Derivatives with 1,3-Oxazole
    Jacky C.-H. Yim, Masakazu Nambo, and Cathleen M. Crudden
    Org. Lett. 19, 3715–3718 (2017)
    DOI: 10.1021/acs.orglett.7b01510

  6. ESIPT-active organic compounds with white luminescence based on crystallization-induced keto emission (CIKE)
    Huapeng Liu, Xiao Cheng, Houyu Zhang, Yue Wang, Hongyu Zhang and Shigehiro Yamaguchi
    Chem. Commun. 53, 7832-7835 (2017)
    DOI: 10.1039/c7cc03758a

  7. Global rise of potential health hazards caused by blue light-induced circadian disruption in modern aging societies
    Megumi Hatori, Claude Gronfier, Russell N. Van Gelder, Paul S. Bernstein, Josep Carreras, Satchidananda Panda, Frederick Marks, David Sliney, Charles E. Hunt, Tsuyoshi Hirota, Toshiharu Furukawa and Kazuo Tsubota
    NPJ Aging Mech. Dis. 3, 9 (2017)
    DOI: 10.1038/s41514-017-0010-2

  8. Three-dimensional reconstruction for coherent diffraction patterns obtained by XFEL
    Miki Nakano, Osamu Miyashita, Slavica Jonic, Changyong Song, Daewoong Nam, Yasumasa Joti and Florence Tama
    J. Synchrot. Radiat. 24 (2017)
    DOI: 10.1107/S1600577517007767

  9. Constructing Sulfonic Acid Functionalized Anthracene Derived Conjugated Porous Organic Polymer for Efficient Metal-Free Catalytic Acetalization of Bio-Glycerol
    Sudipta K. Kundu, Ramana Singuru, Taku Hayashi, Yuh Hijikata, Stephan Irle and John Mondal
    ChemistrySelect 2, 4705−4716 (2017)
    DOI: 10.1002/slct.201700901

  10. Blue Light Regulation of Stomatal Opening and the Plasma Membrane H+-ATPase
    Shin-ichiro Inoue and Toshinori Kinoshita
    Plant Physiol. 173, 531–538 (2017)
    DOI: 10.1104/pp.17.00166

  11. Small Pores with a Big Impact
    Michael R. Blatt, Tim J. Brodribb, Keiko U. Torii
    Plant Physiol. 174, 467–469 (2017)
    DOI: 10.1104/pp.17.00642

  12. Photoredox ketone catalysis for the direct C-H imidation and acyloxylation of arenes
    Chandra Bhushan Tripathi, Tsuyoshi Ohtani, Michael T. Corbett and Takashi Ooi
    Chem. Sci. 8, 5622-5627 (2017)
    DOI: 10.1039/C7SC01700F

  13. Flapping Viscosity Probe That Shows Polarity-Independent Ratiometric Fluorescence
    Ryota Kotani, Hikaru Sotome, Hajime Okajima, Soichi Yokoyama, Yumi Nakaike, Akihiro Kashiwagi, Chigusa Mori, Yuki Nakada, Shigehiro Yamaguchi, Atsuhiro Osuka, Akira Sakamoto, Hiroshi Miyasaka and Shohei Saito
    J. Mater. Chem. C 5, 5248–5256 (2017)
    DOI: 10.1039/C7TC01533J

  14. N-Sulfonyl α-imino ester-derived chiral oxaziridines: catalytic asymmetric synthesis and application as a modular chiral organic oxidant
    Naoya Tanaka, Ryosuke Tsutsumi, Daisuke Uraguchi and Takashi Ooi
    Chem. Commun. 53, 6999-7002 (2017)
    DOI: 10.1039/C7CC02502E

  15. Determination of the absolute configuration of compounds bearing chiral quaternary carbon centers using the crystalline sponge method
    Shiho Sairenji, Takashi Kikuchi, Mohamed Ahmed Abozeid, Shinobu Takizawa, Hiroaki Sasai, Yuichiro Ando, Kohsuke Ohmatsu, Takashi Ooi and Makoto Fujita
    Chem. Sci. 8, 5132−5136 (2017)
    DOI: 10.1039/C7SC01524K

  16. Cells reprogramming to stem cells inhibit the reprogramming of adjacent cells in the moss Physcomitrella patens
    Yoshikatsu Sato, Nagisa Sugimoto, Tadayoshi Hirai, Akihiro Imai, Minoru Kubo, Yuji Hiwatashi, Tomoaki Nishiyama & Mitsuyasu Hasebe
    Sci. Rep. 7, 1909 (2017)
    DOI: 10.1038/s41598-017-01786-1

  17. Synthesis, properties, and crystal structures of π-extended double [6]helicenes: contorted multi-dimensional stacking lattice
    Takao Fujikawa, Nobuhiko Mitoma, Atsushi Wakamiya, Akinori Saeki, Yasutomo Segawa and Kenichiro Itami
    Org. Biomol. Chem. 15, 4697–4703 (2017)
    DOI: 10.1039/c7ob00987a

  18. A Near-Infrared Dye that Undergoes Multiple Interconversions through Acid-Base Equilibrium and Reversible Redox Processes
    Kengo Asai, Aiko Fukazawa and Shigehiro Yamaguchi
    Angew. Chem. Int. Ed. 56, 6848–6852 (2017)
    DOI: 10.1002/anie.201702140

  19. Drosophila Dalmatian combines sororin and shugoshin roles in establishment and protection of cohesion
    Takashi Yamada, Eri Tahara, Mai Kanke, Keiko Kuwata & Tomoko Nishiyama
    EMBO J. 36, 1513–1527 (2017)
    DOI: 10.15252/embj.201695607

  20. Capability of tip-growing plant cells to penetrate into extremely narrow gaps
    Naoki Yanagisawa, Nagisa Sugimoto, Hideyuki Arata, Tetsuya Higashiyama & Yoshikatsu Sato
    Sci. Rep. 7, 1403 (2017)
    DOI: 10.1038/s41598-017-01610-w

  21. Direct Coupling of Naphthalene and Sulfonimides Promoted by DDQ and Blue Light
    Yota Sakakibara, Eri Ito, Takahiro Kawakami, Shuya Yamada, Kei Murakami, and Kenichiro Itami
    Chem. Lett. 46, 1014–1016 (2017)
    DOI: 10.1246/cl.170321

  22. C-H Functionalization of Azines
    Kei Murakami, Shuya Yamada, Takeshi Kaneda, and Kenichiro Itami
    Chem. Rev. 117, 9302–9332 (2017)
    DOI: 10.1021/acs.chemrev.7b00021

  23. Electrostatic Potential Charge including Spatial Electron Density Distribution (SEDD): Application to Biosystems
    Daisuke Yokogawa and Arifin
    Bull. Chem. Soc. Jpn. 90, 831−837 (2017)
    DOI: 10.1246/bcsj.20170099

  24. Unique site-selectivity control in asymmetric Michael addition of azlactone to alkenyl dienyl ketones enabled by P-spiro chiral iminophosphorane catalysis
    Ken Yoshioka, Kohei Yamada, Daisuke Uraguchi and Takashi Ooi
    Chem. Commun. 53, 5495−5498 (2017)
    DOI: 10.1039/C7CC01715D

  25. Measurement of Stomatal Conductance in Rice
    Yin Wang and Toshinori Kinoshita
    Bio-protocol 7, e2266 (2017)
    DOI: 10.21769/BioProtoc.2226

  26. Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote
    Minako Ueda, Ernst Aichinger, Wen Gong, Edwin Groot, Inge Verstraeten, Lam Dai Vu, Ive De Smet, Tetsuya Higashiyama, Masaaki Umeda, and Thomas Laux
    Genes & Dev. 31,617–627 (2017)
    DOI: 10.1101/gad.292409.116

  27. Water-Soluble N-Heterocyclic Carbene-Protected Gold Nanoparticles: Size-Controlled Synthesis, Stability, and Optical Properties
    Kirsi Salorinne, Renee W. Y. Man, Chien-Hung Li, Masayasu Taki, Masakazu Nambo and Cathleen M. Crudden
    Angew. Chem. Int. Ed. 56, 6198–6202 (2017)
    DOI: 10.1002/anie.201701605

  28. Brassinosteroid Involvement in Arabidopsis thaliana Stomatal Opening
    Shin-ichiro Inoue, Nozomi Iwashita, Yohei Takahashi, Eiji Gotoh, Eiji Okuma, Maki Hayashi, Ryohei Tabata, Atsushi Takemiya, Yoshiyuki Murata, Michio Doi, Toshinori Kinoshita, Ken-ichiro Shimazaki
    Plant Cell Physiol. 58, 1048–1058 (2017)
    DOI: 10.1093/pcp/pcx049

  29. Theoretical Elucidation of Potential Enantioselectivity in a Pd-Catalyzed Aromatic C-H Coupling Reaction
    Yoshio Nishimoto, Hiroki Kondo, Kazuya Yamaguchi, Daisuke Yokogawa, Junichiro Yamaguchi, Kenichiro Itami, and Stephan Irle
    J. Org. Chem. 82, 4900−4906 (2017)
    DOI: 10.1021/acs.joc.6b02675

  30. Synthesis of a carbon nanobelt
    Guillaume Povie, Yasutomo Segawa, Taishi Nishihara, Yuhei Miyauchi, Kenichiro Itami
    Science 356, 172–175 (2017)
    DOI: 10.1126/science.aam8158

  31. [5.5]-P-Spirocyclic Chiral Triaminoiminophosphorane-Catalyzed Asymmetric Hydrophosphonylation of Aldehydes and Ynones
    Daisuke Uraguchi, Takaki Ito, Yuto Kimura, Yumiko Nobori, Makoto Sato, and Takashi Ooi
    Bull. Chem. Soc. Jpn. 90, 546−555 (2017)
    DOI: 10.1246/bcsj.20170040

  32. Molecular actions of two synthetic brassinosteroids, iso-carbaBL and 6-deoxoBL, which cause altered physiological activities between Arabidopsis and rice
    Ayako Nakamura, Naoya Tochio, Shozo Fujioka, Shinsaku Ito, Takanori Kigawa, Yukihisa Shimada, Makoto Matsuoka, Shigeo Yoshida, Toshinori Kinoshita, Tadao Asami, Hideharu Seto, Takeshi Nakano
    PLoS ONE 12, e0174015 (2017)
    DOI: 10.1371/journal.pone.0174015

  33. Synthesis of multiply arylated pyridines
    Takashi Asako, Wakana Hayashi, Kazuma Amaike, Shin Suzuki, Kenichiro Itami, Kei Muto, Junichiro Yamaguchi
    Tetrahedron 73, 3669–3676 (2017)
    DOI: 10.1016/j.tet.2017.03.095

  34. Flexible Fitting to Cryo-EM Density Map Using Ensemble Molecular Dynamics Simulations
    Osamu Miyashita, Chigusa Kobayashi, Takaharu Mori, Yuji Sugita, and Florence Tama
    J. Comput. Chem. 38, 1447-1461 (2017)
    DOI: 10.1002/jcc.24785

  35. A Raf-like protein kinase BHP mediates blue light-dependent stomatal opening
    Maki Hayashi, Shin-ichiro Inoue, Yoshihisa Ueno & Toshinori Kinoshita
    Sci. Rep. 7, 45586 (2017)
    DOI: 10.1038/srep45586

  36. Annulative π-Extension (APEX) of Heteroarenes with Dibenzosiloles and Dibenzogermoles by Palladium/o-Chloranil Catalysis
    Kyohei Ozaki, Wataru Matsuoka, Hideto Ito, and Kenichiro Itami
    Org. Lett. 19, 1930−1933 (2017)
    DOI: 10.1021/acs.orglett.7b00684

  37. Hybrid Approach for Biological Structure Modeling: Cryo-electron Microscopy and X-ray Free Electron Laser Data
    Osamu Miyashita, Florence Tama
    Seibutsu Butsuri 2, 90–94 (2017)
    DOI: 10.2142/biophys.57.090

  38. Chemical Synthesis of a Homoserine-Mutant of the Antibacterial, Head-to-Tail Cyclized Protein AS-48 by α-Ketoacid-Hydroxylamine (KAHA) Ligation
    Florian Rohrbachera, André Zwickya and Jeffrey W. Bode
    Chem. Sci. 8, 4051–4055 (2017)
    DOI: 10.1039/C7SC00789B

  39. Structural influence of transition metal (Sc, Y, and Lu) atoms inside gold nanoparticles
    Li Xia Zhao, Yuh Hijikata, Stephan Irle
    Int. J. Quantum Chem. 117, e25371 (2017)
    DOI: 10.1002/qua.25371

  40. Complete diastereodivergence in asymmetric 1,6-addition reactions enabled by minimal modification of a chiral catalyst
    Daisuke Uraguchi, Ken Yoshioka & Takashi Ooi
    Nat. Commun. 8, 14793 (2017)
    DOI: 10.1038/ncomms14793

  41. Polymorphism of [6]Cycloparaphenylene for Packing Structure-dependent Host-Guest Interaction
    Tomohiro Fukushima, Hirotoshi Sakamoto, Kohei Tanaka, Yuh Hijikata, Stephan Irle, and Kenichiro Itami
    Chem. Lett. 46, 855–857 (2017)
    DOI: 10.1246/cl.170210

  42. Stereoselective Aza-Henry Reaction of 3-Nitro-dihydro-2(1H)-quinolones with N-Boc-Aldimines under the Catalysis of Chiral Ammonium Betaines
    Daisuke Uraguchi, Masahiro Torii, Kohsuke Kato, and Takashi Ooi
    Heterocycles 94, 441−447 (2017)
    DOI: 10.3987/COM-16-13642

  43. Acridinium Betaine as a Single-Electron-Transfer Catalyst: Design and Application to Dimerization of Oxindoles
    Daisuke Uraguchi, Masahiro Torii, and Takashi Ooi
    ACS Catal. 7, 2765−2769 (2017)
    DOI: 10.1021/acscatal.7b00265

  44. Rh-catalyzed regiodivergent hydrosilylation of acyl aminocyclopropanes controlled by monophosphine ligands
    Hiroki Kondo, Kenichiro Itami, and Junichiro Yamaguchi
    Chem. Sci. 8, 3799−3803 (2017)
    DOI: 10.1039/c7sc00071e

  45. Double-stranded helical oligomers covalently-bridged by rotary cyclic boronate esters
    Hiroki Iida, Kenji Ohmura, Ryuta Noda, Soichiro Iwahana, Hiroshi Katagiri, Naoki Ousaka, Taku Hayashi, Yuh Hijikata, Stephan Irle, and Eiji Yashima
    Chem. Asian J. 12, 927–935 (2017)
    DOI: 10.1002/asia.201700162

  46. Metal-organic cuboctahedra for synthetic ion channels with multiple conductance states
    Ryuji Kawano, Nao Horike, Yuh Hijikata, Mio Kondo, Arnau Carne-Sanchez, Patrick Larpent, Shuya Ikemura, Toshihisa Osaki, Koki Kamiya, Susumu Kitagawa, Shoji Takeuchi, and Shuhei Furukawa
    Chem 2, 393–403 (2017)
    DOI: 10.1016/j.chempr.2017.02.002

  47. Catalytic Dehydrogenative C-H Imidation of Arenes Enabled by Photo-generated Hole Donation to Sulfonimide
    Eri Ito, Tomohiro Fukushima, Takahiro Kawakami, Kei Murakami, and Kenichiro Itami
    Chem 2, 383–392 (2017)
    DOI: 10.1016/j.chempr.2017.02.006

  48. Autocrine regulation of stomatal differentiation potential by EPF1 and ERECTA-LIKE1 ligand-receptor signaling
    Xingyun Qi, Soon-Ki Han, Jonathan H. Dang, Jacqueline M. Garrick, Masaki Ito, Alex K. Hofstetter, Keiko U. Torii
    eLife 6, e24102 (2017)
    DOI: 10.7554/eLife.24102.001

  49. In Situ Electrophilic Activation of Hydrogen Peroxide for Catalytic Asymmetric α-Hydroxylation of 3-Substituted Oxindoles
    Kohsuke Ohmatsu, Yuichiro Ando, Takashi Ooi
    Synlett 28, 1291−1294 (2017)
    DOI: 10.1055/s-0036-1558958

  50. Flexible coordination sphere of a penta-coordinate complex: a correlation between conformation and redox potentials in the solid state
    Ryo Ohtani, Yuu Kitamura, Yuh Hijikata, Masaaki Nakamura, Leonard F. Lindoy and Shinya Hayami
    Dalton Trans. 46, 3749–3754 (2017)
    DOI: 10.1039/C7DT00233E

  51. Stomatal development in time: the past and the future
    Xian Qu, Kylee M. Peterson and Keiko U. Torii
    Curr. Opin. Genet. Dev. 45, 1–9 (2017)
    DOI: 10.1016/j.gde.2017.02.001

  52. A new triazine based covalent organic framework for high-performance capacitive energy storage
    Piyali Bhanja, Kousik Bhunia, Sabuj K. Das, Debabrata Pradhan, Ryuto Kimura, Yuh Hijikata, Stephan Irle and Asim Bhaumik
    ChemSusChem 10, 921–929 (2017)
    DOI: 10.1002/cssc.201601571

  53. Decarbonylative Diaryl Ether Synthesis by Pd and Ni Catalysis
    Ryosuke Takise, Ryota Isshiki, Kei Muto, Kenichiro Itami, and Junichiro Yamaguchi
    J. Am. Chem. Soc. 139, 3340−3343 (2017)
    DOI: 10.1021/jacs.7b00049

  54. Molecular mechanism regulating seasonality
    Keisuke Ikegami, Takashi Yoshimura
    In Biological Timekeeping: Clocks, Rhythms and Behaviour Kumar V ed., Springer (2017)
    DOI: 10.1007/978-81-322-3688-7_28

  55. Borocation catalysis
    P. Eisenberger and C. M. Crudden
    Dalton Trans. 46, 4874–4887 (2017)
    DOI: 10.1039/c6dt04232e

  56. Theoretical Study on Nonradiative Decay of Dimethylaminobenzonitrile through Triplet State in Gas-Phase, Nonpolar, and Polar Solutions
    Kayo Suda and Daisuke Yokogawa
    J. Phys. Chem. B 121, 2164−2170 (2017)
    DOI: 10.1021/acs.jpcb.6b11654

  57. Theoretical Rationalization for Reduced Charge Recombination in Bulky Carbazole-Based Sensitizers in Solar Cells
    Yaowarat Surakhot, Viktor Laszlo, Chirawat Chitpakdee, Vinich Promarak, Taweesak Sudyoadsuk, Nawee Kungwan, Tim Kowalczyk, Stephan Irle, and Siriporn Jungsuttiwong
    J. Comput. Chem. 38, 901−909 (2017)
    DOI: 10.1002/jcc.24751

  58. Synthesis, Structure, and Electrochemical Property of a Bimetallic Bis-2-pyridylidene Palladium Acetate Complex
    Tetsushi Yoshidomi, Tomohiro Fukushima, Kenichiro Itami, and Yasutomo Segawa
    Chem. Lett. 46, 587–590 (2017)
    DOI: 10.1246/cl.170091

  59. Cryptic bioactivity capacitated by synthetic hybrid plant peptides
    Yuki Hirakawa, Hidefumi Shinohara, Kai Welke, Stephan Irle, Yoshikatsu Matsubayashi, Keiko U. Torii & Naoyuki Uchida
    Nature Commun. 8, 14318 (2017)
    DOI: 10.1038/ncomms14318

  60. Potassium Acyltrifluoroborate (KAT) Ligations are Orthogonal to Thiol-Michael and SPAAC Reactions: Covalent Dual Immobilization of Proteins onto Synthetic PEG Hydrogels
    Dmitry Mazunin and Jeffrey W. Bode
    Helv. Chim. Acta 100, e1600311 (2017)
    DOI: 10.1002/hlca.201600311

  61. Color-tunable fluorescent nanoparticles encapsulating trialkylsilyl-substituted pyrene liquids
    Masayasu Taki, Saki Azeyanagi, Kenzo Hayashi and Shigehiro Yamaguchi
    J. Mater. Chem. C 5, 2142–2148 (2017)
    DOI: 10.1039/c6tc05208h

  62. Förster Resonance Energy Transfer between Fluorescent Proteins: Efficient Transition Charge-Based Study
    Hirotaka Kitoh-Nishioka, Daisuke Yokogawa, and Stephan Irle
    J. Phys. Chem. C 121, 4220−4238 (2017)
    DOI: 10.1021/acs.jpcc.7b00833

  63. A Lin28 homologue reprograms differentiated cells to stem cells in the moss Physcomitrella patens
    Chen Li, Yusuke Sako, Akihiro Imai, Tomoaki Nishiyama, Kari Thompson, Minoru Kubo, Yuji Hiwatashi, Yukiko Kabeya, Dale Karlson, Shu-Hsing Wu, Masaki Ishikawa, Takashi Murata, Philip N. Benfey, Yoshikatsu Sato, Yosuke Tamada, and Mitsuyasu Hasebe
    Nat. Commun. 2017, 8, 14242
    DOI: 10.1038/ncomms14242

  64. Syntheses of Biologically Active 2-Arylcyclopropylamines
    Shin Miyamura, Kenichiro Itami, Junichiro Yamaguchi
    Synthesis 49, A–S (2017)
    DOI: 10.1055/s-0036-1588390

  65. Synthesis and Physical Properties of Strained Doubly Phosphorus-Bridged Biaryls and Viologens
    Tobias Greulich, Eriko Yamaguchi, Carsten Doerenkamp, Maximilian Lübbesmeyer, Constantin Gabriel Daniliuc, Aiko Fukazawa, Hellmut Eckert, Shigehiro Yamaguchi and Armido Studer
    Chem. Eur. J. 23, 6029 – 6033 (2017)
    DOI: 10.1002/chem.201605272

  66. Theoretical Studies on Ethanol Dissociation on Iron Nanoparticles in the Early Stage of SWCNT Growth
    Ying Wang, Menggai Jiao, Zhijian Wu, and Stephan Irle
    J. Phys. Chem. C 121, 2276−2284 (2017)
    DOI: 10.1021/acs.jpcc.6b12207

  67. Facile Synthesis of Polycyclic Pentalenes with Enhanced Hückel Antiaromaticity
    Hiroya Oshima, Aiko Fukazawa and Shigehiro Yamaguchi
    Angew. Chem. Int. Ed. 56, 3270–3274 (2017)
    DOI: 10.1002/anie.201611344

  68. Gametophytic Pollen Tube Guidance: Attractant Peptides, Gametic Controls, and Receptors
    Tetsuya Higashiyama and Wei-cai Yang
    Plant Physiol. 173, 112–121 (2017)
    DOI: 10.1104/pp.16.01571

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