Buchholzer M. & Frommer W.B. (2022) An increasing number of counters regulate genome editing in crops. New Phytol. DOI: 10.1111/nph.18333
Kleist T., Lin W.I., Xu S., Mksaev G., Sadoine M., Haswell E.S., Frommer W.B. & Wudick M. (2022) OzTracs: Optical osmolality reporters engineered from mechanosensitive ion channels. Biomolecules 12, 787. DOI: 10.3390/biom12060787
Nakamura M., Yagi N. & Hashimoto T. (2022) Finding a tight place to cut: how katanin is targeted to cellular severing sites. Quantitative Plant Biology, 3: e8, 1-7
Wu L.B., Eom, J.S., Isoda R., Li C., Char S.N., Luo D., Luu V.T., Nakamura M., Yang B. & Frommer W.B. (2022). OsSWEET11b, a sixth leaf blight susceptibility gene involved in sugar transport-dependent male fertility. bioRxiv DOI: 10.1101/2021.08.21.457078; New Phytologist DOI: 10.1111/nph.18054
Park J., Chavez T.M., Guistwhite J.A., Gwon S., Frommer W.B. & Cheung L.S. (2022) Development and quantitative analysis of a biosensor based on the Arabidopsis SWEET1 sugar transporter. Proc. Natl. Acad. Sci. USA 119, e2119183119 DOI: 10.1073/pnas.2119183119
2021
Castro-Rodríguez V., Kleist T.J., Gappel N.M., Okumoto S., Machado M., Denyer T., Timmermans M.C.P., Frommer W.B. & Wudick M.M. (2021) Sponging of glutamate at the outer plasma membrane surface reveals roles for glutamate in development. Plant J.109: 664-674online.
Moe-Lange J., Gappel N., Ehrhardt D.W., Haswell E.S., Frommer W.B. & Kleist T. (2021) Interdependence of a mechanosensitive anion channel and glutamate receptors in distal sound signaling. Science Adv. 7: eabg4298. DOI: 10.1126/sciadv.abg4298
Savadel S.D., Hartwig T., Turpin Z.M., Vera D.L., LungP., Sui X., Frommer W.B., Dennis J.H., Zhang J. & Bass H.W. (2021) The native cistome and sequence motif families of the maize ear. PLoS Genetics 17: e1009689. DOI: 10.1371/journal.pgen.1009689
Sadoine M., Ishikawa Y., Kleist T.J., Wudick M.M., Nakamura M., Grossmann, G., Frommer W.B. & Ho C.H. (2021) Designs, applications and limitations of genetically encoded fluorescent sensors to explore plant biology – looking back and ahead. Plant Physiol.187,485-503 DOI:10.1093/plphys/kiab353
Yagi N., Yoshinari A., Iwatate R., Frommer W.B. & Nakamura M. (2021) Advances in synthetic fluorescent probes labeling for live cell imaging in plants. Plant Cell Physiol. DOI: 10.1093/pcp/pcab104
Kim J.Y., Symeonidi E., Pang T.Y., Denyer T., Weidauer D., Wudick M., Lercher M., TimmermansM. & Frommer W.B. (2021) Distinct identities of leaf phloem cells revealed by single cell transcriptomics. Plant Cell33, 511-530 DOI:10.1093/plcell/koaa060
Bezrutczyk M., Zöllner N., Hartwig T., Lautwein T., Köhrer K., Frommer W.B. & Kim J.Y. (2021) Evidence for phloem loading via the abaxial bundle sheath cells in maize leaves. Plant Cell33, 531-547 DOI:10.1093/plcell/koaa055
Yagi N., Kato T., Matsunaga S. Ehrhardt D.W., Nakamura M. & Hashimoto T. (2021) An anchoring complex recruits katanin for microtubule severing at the plant cortical nucleation sites. Nature Communications12, 3687 DOI:10.1038/s41467-021-24067-y
Sadoine M., Reger M., Wong K.M. & Frommer W.B. (2021) Affinity series of genetically encoded high sensitivity Förster resonance energy transfer sensors for sucrose. ACS Biosensors6, 1779-1784. doi: 10.1021/acssensors.0c02495
Kim J.Y., Loo E., Frommer W.B. & Wudick M.W. (2021) Cellular export of sugars and amino acids: Role in feeding other cells and organisms. Plant Physiol. online. DOI:10.1093/plphys/kiab228
Prior M.J., Selvanayagam J., Kim J.G., Tomar M., Jonikas M.C., Mudgett M.B., Smeekens J., Hanson J. & Frommer W.B. (2021) Arabidopsis bZIP11 is a susceptibility factor during Pseudomonas syringae infection. Mol. Plant Microbe Interact. MPMI11200310R. DOI: 10.1094/MPMI-11-20-0310-R
Isoda R., Yoshinari A., Ishikawa Y., Sadoine M., Simon R., Frommer W.B. & Nakamura M. (2021) Sensors for the quantification, localization and analysis of the dynamics of plant hormones. Plant J.105, 542-557. DOI: 10.1111/tpj.15096
Yoshinari A., Moe-Lange J., Kleist T.J., Cartwrighter H.N., Quint D.A., Ehrhardt D.W., Frommer W.B. & Nakamura M. (2021) Using genetically encoded fluorescent biosensors for quantitative in vivo imaging. Arabidopsis Protocols2200, 303-322. DOI: 10.1007/978-1-0716-0880-7_14
2020
Nakamura M. & Hashimoto T. (2020) Mechanistic insights into plant chiral growth. Symmetry12, 2056. DOI: 10.3390/sym12122056
Luu V.T., Stiebner M., Maldonado P.M., Valdez Gutierrez S.P., Slamet-Luedin I.H. & Frommer W.B. (2020) Efficient Agrobacterium-mediated Transformation of the Elite–Indica Rice Variety Komboka. Bio-protocol10, e3739. DOI: 10.21769/BioProtoc.3739
Sadoine M., Castro-Rodríguez V., Poloczek T., Javot H., Sunal E., Wudick, M. & Frommer W.B. (2020) Affinity Purification of GO-Matryoshka Biosensors from E. coli for Quantitative Ratiometric Fluorescence Analyses. Bio-protocol10, e3773. DOI: 10.21769/BioProtoc.3773
Frommer W.B. & Itami K. (2020) The prospects of Excellence Initiatives in research: Key Ingredients for a Successful Academic Research Institute. EMBO Rep.21, e51398. DOI: 10.15252/embr.202051398
Iwatate R.J., Akira Yoshinari A., Yagi N., Ogasawara H., Grzybowski M., Kamiya M., Taki M., Yamaguchi S., Frommer W.B. & Nakamura M. (2020) Covalent self-labeling of tagged proteins with chemical fluorescent dyes in BY-2 cells and Arabidopsis seedlings. The Plant Cell32, 3081-3094. DOI: 10.1105/tpc.20.00439
Schmidt S.M., Belisle M. & Frommer W.B. (2020) The evolving landscape around genome editing in agriculture: Many countries have exempted or move to exempt forms of genome editing from GMO regulation of crop plants. EMBO Rep., e50680. DOI: 10.15252/embr.202050680
Peng Q., Cai Y., Lai E., Nakamura M., Liao L., Zheng B., Ogutu C., Cherono S. & Han Y. (2020) The sucrose transporter MdSUT4.1 participated in the regulation of fruit sugar accumulation in apple. BMC Plant Biol.20, 191. DOI: 10.1186/s12870-020-02406-3
2019
Oliva R., Ji C., Atienza-Grande G., Huguet-Tapia J.C., Pérez-Quintéro A., Li T., Eom J.S., Li C., Nguyen H., Liu B., Auguy F., Scaliano C., Luu V.T., Dossa G.S., Cunnac S., Schmidt S.M., Slamet-Loedin I.H., Vera Cruz C., Szurek B., Frommer W.B., White F.F. & Yang B. (2019) Broad-spectrum resistance to bacterial blight in rice using genome editing. Nature Biotech.37, 1344-1350. DOI: 10.1038/s41587-019-0267-z
Eom J.S., Luo D., Atienza-Grande G., Yang J., Ji C., Luu V.T., Huguet-Tapia J.C., Liu B., Char S.N., Liu B., Nguyen H., Schmidt S.M., Szurek B., Vera Cruz C., White F.F., Oliva R., Yang B. & Frommer W.B. (2019) Diagnostic kit for rice blight resistance. Nature Biotech.37, 1372-1379. DOI: 10.1038/s41587-019-0268-y
Sasaki T., Tsutsumi M., Omoto K., Murata T., Yagi N., Nakamura M., Nemoto T., Hasebe M. & Oda Y. (2019) A novel katanin-tethering machinery accelerates cytokinesis. Curr. Biol.29, 4060-4070. DOI:10.1016/j.cub.2019.09.049.
Lindeboom J.J., Nakamura M., Saltini M., Hibbel A., Walia A., Ketelaar T., Emons A.M.C., Sedbrook J.C., Kirik V., Mulder B.M. & Ehrhardt D.W. (2019) CLASP stabilization of plus ends created by severing promotes microtubule creation and reorientation. J. Cell Biol.218, 190-205. DOI: 10.1083/jcb.201805047
2018
Nakamura M. & Yagi N. (2018) 青色光に応答した微小管ダイナミクスBSJ-Review-9C, 120-129 「植物の柔軟な発生を支える細胞骨格ダイナミクス」
Bezrutczyk M., Hartwig T., Horschman M., Char S.N., Yang J., Yang B., Frommer W.B. & Sosso D. (2018) Impaired phloaem loading in zmsweet13a,b,c sucrose transporter triple knock-out mutants in Zea mays. New Phytol.218, 594-603
Yang J., Luo D., Yang B., Frommer W.B. & Eom J.S. (2018) SWEET11 and SWEET15 as key players in seed filling in rice. New Phytol.218, 604-615
Nakamura M., Lindeboom J.J., Saltini M., Mulder B.M & Ehrhardt D.W. SPR2 protects minus ends to promote severing and reorientation of plant cortical microtubule arrays. J. Cell Bioi.217, 915-927
Bezrutczyk M., Yang J., Eom J.S., Prior M., Sosso D., Hartwig T., Szurek B., Olivia R., Vera-Cruz C., White F.F., Yang B. & Frommer W.B. (2018) Sugar flux and signaling in plant-microbe interactions. Plant J.93, 675-685
2017
Rizza A., Walia A., Lanquar V., Frommer W.B. & Jones A.M. (2017) Gibberellin gradients in elongating tissues stimulated by phytochrome interacting factors in hypocotyls. Nature Plants3, 803-813 (PMID: 28970478).
Ast C., Foret J., Oltrogge L.M., De Michele R., Kleist T.J., Ho C.H. & Frommer W.B. (2017) Ratiometric Matryoshka biosensors from a nested cassette of green- and orange-emitting fluorescent proteins. Nature Comm.431 (http://rdcu.be/vAro) (PMID:28874729)
Cox Jr. K.L., Meng F., Wilkins K.E., Li F., Wang P., Booher N.J., Chen L.Q., Zheng H., Gao Q., Zheng Y., Fei Z., Yu J.Z., Isakeit T., Wheeler T., Wolf B. Frommer W.B., He P., Bogdanove & Shan L. (2017) TAL effector-mediated induction of a SWEET sugar transporter confers susceptibility to bacterial blight of cotton. Nature Comm.169, 96-107.e12 (PMID:28537271)
Latorraca N., Fastman N., Venkatakrishnan A.J., Frommer W.B., Dror R. & Feng L. (2017) Mechanism of substrate translocation in an alternating access transporter. Cell169, 96-107 (PMID: 28340354).
Sugiyama A., Saida Y, Yoshimizu M, Takanashi K., Sosso D., Frommer W.B. & Yazaki K. (2016) Molecular characterization of LjSWEET3, a sucrose transporter in nodule of Lotus japonicus. Plant Cell Physiol.58, 298-306
2016
Hu Y.B., Sosso D., Qu X.Q., Chen L.Q., Ma L., Chermak D., Zhang D.C. & Frommer W.B. (2016) Phylogenetic evidence for a fusion of archaeal and bacterial SemiSWEETs to form eukaryotic SWEETs and identification of SWEET hexose transporters in the amphibian chytrid pathogenBatrachochytrium dendrobatidis. FASEB J.30, 3644-3654 (PMID: 27411857)
Kryvoruchko I., Sinharoy S., Torres-Jerez I., Sosso D., Pislariu C., Guan D., Murray J., Benedito V., Frommer W.B. & Udvardi M. (2016) MtSWEET11, a nodule-specific sucrose transporter ofMedicago truncatula root nodules. Plant Physiol.171, 554-565 (PMID: 27021190)
Ho C. & Frommer W.B. (2016). Design and functional analysis of fluorescent nitrate and peptide transporter activity sensors in yeast cultures. Bio-protocol6(3): e1728. www.bio-protocol.org/e1728.
de Michele R., McFarlane H.E., Parsons H.T., Meents M.J., Lao J., González Fernández-Niño S., Petzold C.J., Frommer W.B., Samuels A.L. & Heazlewood J.L. (2016) Free-flow electrophoresis of plasma membrane vesicles enhances the quality of the proteome from Arabidopsis seedlings. J. Proteome Res.15, 900-13 (PMID: 26781341).
Feng L. & Frommer W.B. (2016) Evolution of Transporters: The relationship of SWEETs, PQ-loop, and PnuC transporters. Trends Biochem. Sci.41, 118-119 (PMID: 26749089).
2015
White F.F. & Frommer W.B. (2015) Deciphering durable resistance one R gene at a time. Nature Genet.47, 1376-77. (PMID: 26620111)
Sosso D., Li Q.B., Luo D., Schläpfer J., Gendrot G., Suzuki M., Koch K.E., McCarty D.R., Ross-Ibarra J., Rogowsky P., Chourey P.S., Yang B. & Frommer W.B. (2015) Seed filling in domesticated maize depends on SWEET-mediated trans-epithelial hexose transport. Nature Genet.47, 1489-93 (PMID: 26523777)
Provart N., Alonso J., Assmann S., Bergmann D., Brady S., Brkljacic J., Browse J., Chapple C., Colot V., Cutler S., Dangl J., Ehrhardt D., Friesner J, Frommer W.B., Grotewold E., Meyerowitz E., Nemhauser J., Nordborg M., Pikaard C., Shanklin J., Somerville C.R., Somerville S., Stitt M., Torii K., Waese J., Wagner D. & McCourt P. (2015) 50 Years of Arabidopsis research: highlights and future directions. New Phytol.83, 1046-58 (PMID: 26465351).
Tao Y., Li S., Xu Y., Lily S. Cheung L.S., Eom J.S., Chen L.Q., Frommer W.B. & Feng L. (2015) Structure of a eukaryotic seven transmembrane SWEET transporter in a homo-trimeric complex. Nature527, 259-63 (PMID: 26479032).
Chen H.-Y., Huh J.H., Yu Y.C., Ha L.H., Chen L.C., Tholl D., Frommer W.B. & Guo W.J. (2015) The Arabidopsis vacuolar sugar transporter SWEET2 limits carbon sequestration from roots and restricts Pythium infection. Plant J.83, 1046-58 (PMID: 26234706).
Kikuta S., Hou B.H., Sato R., Frommer W.B. & Kikawada T. (2015) FRET sensor-based quantification of intracellular trehalose in mammalian cells. Biosci. Biotech. Biochem.27, 1-4. (PMID: 26214383)
Ast C., De Michele R., Kumke M.U. & Frommer W.B. (2015) Single-fluorophore membrane transport activity sensors with dual-emission read-out. eLife4:e07113 (PMID: 26090909)
Frommer W.B. & Feng L. (2015) Structure and function of SemiSWEET sugar transporters. Trends Biochem. Sci.40, 480-6 (PMID: 26071195).
Eom J.S., Chen L.Q., Sosso D., Julius, B.T., Lin IW., Qu X.Q. Braun D.M. & Frommer W.B. (2015) SWEETs, transporters for intra- and intercellular sugar translocation. Curr. Opin. Plant Biol.25, 53-62 (PMID: 25988582).
Zhou J., Peng Z, Long J., Sosso D., Liu B., Eom J.S., Huang S., Vera Cruz C., Frommer W.B., White F.F. & Yang B. (2015) Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice. Plant J.82, 632-43 (PMID: 25824104).
Chen L.Q., Lin I W., Qu XQ, Sosso D., McFarlane H.E., Londoño A., Samuels A.L. & Frommer W.B. (2015) A cascade three sequentially expressed SWEET sucrose efflux transporters in maternal tissues of the seed coat necessary for embryo nutrition. Plant Cell27, 607-19 (PMID: 25794936).
Rosas-Santiago P., Lagunas-Gómez D., Barkla B.J., Vera-Estrella R., Jones A., Lalonde S., Frommer W.B., Sychrová H., Zimmermannova O. & Pantoja O. (2015) The rice cornichon (OsCNIH1) cargo receptor interacts with the sodium transporter OsHKT1;3 and targets it to the Golgi. J. Exp. Bot.66, 2733-48 (PMID: 25750424).
Chen L.Q, Cheung L., Feng L., Tanner W. & Frommer W.B. (2015) Transport of sugars. Annu. Rev. Biochem.84, 865-94 (PMID: 25747398).
Ast C., Frommer W.B. & De Michele R. (2015) Quantification of extracellular ammonium concentrations and transporter activity in yeast using AmTrac fluorescent sensors. BioProtocols5, 1, e1372. (www.bioprotocol.org/e1372)
Nakamura M. (2015) Microtubule nucleating and severing enzymes for modifying microtubule array organization and cell morphogenesis in response to environmental cues. New Phytol.205 1022-1027
2014
Cohn M., Bart R., Shybut M., Dahlbeck D., Gomez M., Morbitzer R., Hou B.H., Frommer W.B., Lahaye T. & Staskawicz B. (2014) Xanthomonas axonopodis virulence is promoted by TAL effector-mediated induction of a SWEET sugar transporter in cassava. Mol. Plant Microbe Interact. 27, 1186-98. (PMID: 25083909).
Xu Y., Tao Y, Cheung L., Fan C., Chen LQ, Xu S., Perry K., Frommer W.B. & Feng L. (2014) Structures of bacterial homologues of SWEET transporters in two distinct conformations. Nature515, 448-52. (PMID: 25186729).
Walia A., Nakamura M., Moss D., Kirik V., Hashimoto T. & Ehrhardt D.W. (2014) GCP-WD mediates -TuRC recruitment and the geometry of microtubule nucleation in interphase arrays of Arabidopsis. Curr. Biol.24 2548-55
Denninger P., Bleckmann A., Lausser A., Vogler F., Ott T., Ehrhardt D.W., Frommer W.B., Sprunck S., Dresselhaus T. & Grossmann G. (2014) Male-female communication triggers calcium signatures during fertilization in Arabidopsis. Nature Comm.5, 4645. (PMID: 25145880).
Jones A.M., Xuan Y, Xu M., Wang R.S., Ho C.H., Lalonde S., You C.H., Sardi M.I., Parsa S.A., Smith-Valle E., Pilot G., Pratelli R., Grossmann G., Acharya B.R., Hu H.C., Engineer C., Villiers F., Takeda K., Assmann S.M., Chen J., Kwak J.M., Schroeder J.I., Albert R., Rhee S.Y. & Frommer W.B. (2014) Border control - a membrane-linked interactome of Arabidopsis. Science344, 711-16. (PMID: 24833385).
Ho C.H & Frommer W.B. (2014) Fluorescent sensors for activity and regulation of the nitrate transceptor CHL1/NRT1.1 and oligopeptide transporters. eLife3, e01917. (DOI: 10.7554/eLife.01917; PMID: 24623305).
Lin I W., Sosso D., Chen L.Q., Gase K., Kim S.G., Kessler D., Klinkenberg P., Qu X.Q., Hou B.H., Carter C., Baldwin I.T. & Frommer W.B. (2014) Nectar secretion requires sucrose phosphate synthases and the sugar transporter SWEET9. Nature508, 546-9. (PMID: 24670640).
Zambon A., Zoso A., Luni C., Frommer W.B. & Elvassore N. (2014) Determination of glucose metabolic fluxes in live myoblasts by microfluidic nanosensing and data analysis. Integr. Biol.6,277-88 (PMID: 24424957).
De Michele R. & Frommer W.B. (2014) Mitochondrial Biosensors. Int. J. Biochem. Cell Biol.48C, 39-44. (PMID: 24397954).
Hu Y., Zhang J., Jia H.G., Sosso D., Li T., Frommer W.B., Yang B., White F.F., Wang N. & Jones J.B. (2014) Lateral Organ Boundaries 1 is a disease susceptibility gene for citrus bacterial canker disease. Proc. Natl. Acad. Sci. USA111, E521-9 (DOI:10.1073/pnas.1313271111).
Guo W.J., Nagy R., Chen S.Y., Frommer W.B. & Martinoia E. (2014) SWEET17, a facilitative fructose transporter in the tonoplast of Arabidopsis roots. Plant Physiol.164, 777-89 (PMID: 24381066).
Lanquar V., Grossmann G., Thomine S. & Frommer W.B. (2014) Dynamic imaging of cytosolic zinc in Arabidopsis roots combining FRET sensors and RootChip technology. New Phytol.202,198-208 (PMID: 24372442).
2013
Lindeboom J.J., Nakamura M., Hibbel A., Shundyak K., Gutierrez R., Ketelaar T., Emons A.M., Mulder B.M., Kirik V. & Ehrhardt D.W. (2013) A mechanism for reorientation of cortical microtubule arrays driven by microtubule severing. Science342 1245533
Xuan Y.H., Hu, Y.B., Chen L.Q., Sosso D., Ducat, D.C., Hou B.H. & Frommer W.B. (2013) Functional role of oligomerization for bacterial and plant sugar transporters of the SWEET family. Proc. Natl. Acad Sci USA110, E3685-94.
De Michele R., Ast C., Loqué D., Ho C.H., Andrade S.L.A., Grossmann G., Gehne S., Kumke M.U. & Frommer W.B. (2013) Fluorescent sensors reporting the activity of ammonium transceptors in live cells. eLife2, e00800. (Correction: Elife. 2015 Feb 18;4. doi: 10.7554/eLife.06986).
Schroeder J.I., Delhaize M., Frommer W.B., Guerinot M.L., Harrison M., Herrera-Estrella L., Horie, T., Kochian L., Munns R., Nishizawa N., Tsay Y.F. & Sanders D. (2013) Using membrane transporters to improve crops for sustainable food production. Nature497, 60-66.
Jones A., Grossmann G., Danielson, J.A.H., Sosso D., Chen L. Q., Ho, C.H. & Frommer W.B. (2013) In vivo biochemistry: Applications for small molecule biosensors in plant biology. Curr. Opin. Plant Biol.16, 389-95.
Yuan L., Gu R., Loqué D., Frommer W.B. & von Wirén N. (2013) Allosteric regulation of transport activity by heterotrimerization of Arabidopsis ammonium transporter complexes in vivo. The Plant Cell25, 974-84.
Bermejo C., Haerizadeh F., Sadoine M., Chermak D. & Frommer W.B. (2013) Differential regulation of glucose transport activity in yeast by specific cAMP signatures. Biochem. J.452, 489-97.
Melo C.V., Okumoto S., Gomes J.R., Baptista M.S., Bahr B.A., Frommer W.B. & Duarte C.B. (2013) Spatiotemporal resolution of BDNF neuroprotection against glutamate excitotoxicity in cultured hippocampal neurons. Neuroscience237, 66-86.
Danielson J.A.H. & Frommer W.B. (2013) Plant science. Jack of all trades, master of flowering. Science339, 659-60.
San Marten A., Gutierrez R., Ceballo S., Ruminot I., Lerchundi R., Baeza-Lehnert F., Frommer W.B., & Barros F.L. (2013) A genetically-encoded FRET lactate biosensor shows that neurons are energized by lactate. PLoS One8(2), e57712. DOI: 10.1371/journal.pone.0057712.