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Publications

2014

  1. Hydroxyphenyl-Substituted Benzophosphole Oxides: Impact of the Intramolecular Hydrogen Bond on the Fluorescence Properties
    Aiko Fukazawa,* Hiroshi Osaki and Shigehiro Yamaguchi*
    Asian J. Org. Chem. 3, 122-127 (2014)
    DOI: 10.1002/ajoc.201300227

  2. Identification of mRNAs that Move Over Long Distances Using an RNA-Seq Analysis of Arabidopsis/Nicotiana benthamiana Heterografts
    Michitaka Notaguchi,* Tetsuya Higashiyama and Takamasa Suzuki
    Plant Cell Physiol 56, 311-321 (2015)
    DOI: 10.1093/pcp/pcu210

  3. The Concise Synthesis of Unsymmetric Triarylacetonitriles via Pd‑Catalyzed Sequential Arylation: A New Synthetic Approach to Tri- and Tetraarylmethanes
    Masakazu Nambo,* Muhammad Yar, Joel D. Smith, and Cathleen M. Crudden*
    Org. Lett. 17, 50−53 (2015)
    DOI: 10.1021/ol503213z

  4. Stomatal function has an element of hysteresis
    Yohei Takahashi and Toshinori Kinoshita
    New Phytologist 205, 455–457 (2015)
    DOI: 10.1111/nph.13149

  5. Nearly Exclusive Growth of Small Diameter Semiconducting Single-Wall Carbon Nanotubes from Organic Chemistry Synthetic End-Cap Molecules
    Bilu Liu, Jia Liu, Hai-Bei Li, Radha Bhola, Edward A. Jackson, Lawrence T. Scott, Alister Page, Stephan Irle, Keiji Morokuma, and Chongwu Zhou*
    Nano Lett. 15, 586−595 (2015)
    DOI: 10.1021/nl504066f

  6. Synthesis, binding affinity and structure-activity relationships of novel, selective and dual targeting CCR2 and CCR5 receptor antagonists
    Anna Junker, Artur K. Kokornaczyk, Annelien J. M. Zweemer, Bastian Frehland, Dirk Schepmann, Junichiro Yamaguchi, Kenichiro Itami, Andreas Faust, Sven Hermann, Stefan Wagner, Michael Schäfers, Michael Koch, Christina Weiss, Laura H. Heitman, Klaus Kopka a
    Org. Biomol. Chem., 13, 2407-2422 (2015)
    DOI: 10.1039/c4ob02397h

  7. The carboxyl‑terminal tail of the stalk of Arabidopsis NACK1/HINKEL kinesin is required for its localization to the cell plate formation site
    Michiko Sasabe, Nanako Ishibashi, Tsuyoshi Haruta, Aki Minami, Daisuke Kurihara, Tetsuya Higashiyama, Ryuichi Nishihama, Masaki Ito, Yasunori Machida
    J Plant Res 128, 327–336 (2015)
    DOI: 10.1007/s10265-014-0687-2

  8. Transcriptional, post-transcriptional and post-translational regulation of STM gene expression in Arabidopsis determine gene function in the shoot apex
    José Antonio Aguilar-Martínez, Naoyuki Uchida, Brad Townsley, Donnelly Ann West, Andrea Yanez, Nafeesa Lynn, Seisuke Kimura and Neelima Sinha
    Plant Physiology 167, 424-442 (2015)
    DOI: 10.1104/pp.114.248625

  9. Identification of Small-Molecule Modulators of the Circadian Clock
    Tsuyoshi Hirota*, Steve A. Kay*
    Methods Enzymol 551, 267-282 (2015)
    DOI: 10.1016/bs.mie.2014.10.015

  10. KAHA Ligations That Form Aspartyl Aldehyde Residues as Synthetic Handles for Protein Modification and Purification
    Claudia E. Murar, Frédéric Thuaud, and Jeffrey W. Bode*
    J. Am. Chem. Soc. 136, 18140−18148 (2014)
    DOI: 10.1021/ja511231f

  11. Q&A Takashi Yoshimura
    Takashi Yoshimura
    Current Biology 24, R1108-R1109 (2014)
    DOI: 10.1016/j.cub.2014.10.021

  12. Adaptation to the Local Environment by Modifications of the Photoperiod Response in Crops
    Norihito Nakamichi
    Plant Cell Physiol. 56, 594–604 (2015)
    DOI: 10.1093/pcp/pcu181

  13. Key Structures and Interactions for Binding of Mycobacterium tuberculosis Protein Kinase B Inhibitors from Molecular Dynamics Simulation
    Auradee Punkvang,*, Pharit Kamsri, Patchreenart Saparpakorn, Supa Hannongbua, Peter Wolschann, Stephan Irle and Pornpan Pungpo
    Chem Biol Drug Des 86, 91–101 (2015)
    DOI: 10.1111/cbdd.12465

  14. Ni-Catalyzed a-arylation of esters and amides with phenol derivatives
    Eva Koch, Ryosuke Takise, Armido Studer, Junichiro Yamaguchi* and Kenichiro Itami*
    Chem. Commun., 51, 855 (2015)
    DOI: 10.1039/c4cc08426h

  15. Thiophene-Based, Radial p-Conjugation: Synthesis, Structure, and Photophysical Properties of Cyclo-1,4-phenylene-2',5'-thienylenes
    Hideto Ito, Yukari Mitamura, Yasutomo Segawa, and Kenichiro Itami*
    Angew. Chem. Int. Ed. 54, 159 –163 (2015)
    DOI: 10.1002/anie.201409389

  16. Low Temperature-Induced Circulating Triiodothyronine Accelerates Seasonal Testicular Regression
    Keisuke Ikegami,* Yusuke Atsumi,* Eriko Yorinaga, Hiroko Ono, Itaru Murayama, Yusuke Nakane, Wataru Ota, Natsumi Arai, Akinori Tega, Masayuki Iigo, Veerle M. Darras, Kazuyoshi Tsutsui, Yoshitaka Hayashi, Shosei Yoshida, and Takashi Yoshimura
    Endocrinology 156, 647-659 (2015)
    DOI: 10.1210/en.2014-1741

  17. Tissue-Specific Posttranslational Modification Allows Functional Targeting of Thyrotropin
    Keisuke Ikegami, Xiao-Hui Liao, Yuta Hoshino, Hiroko Ono, Wataru Ota, Yuka Ito, Taeko Nishiwaki-Ohkawa, Chihiro Sato, Ken Kitajima, Masayuki Iigo, Yasufumi Shigeyoshi, Masanobu Yamada, Yoshiharu Murata, Samuel Refetoff,* and Takashi Yoshimura*
    Cell Reports 9, 801–809 (2014)
    DOI: 10.1016/j.celrep.2014.10.006

  18. All-Benzene Carbon Nanocages: Size-Selective Synthesis, Photophysical Properties, and Crystal Structure
    Katsuma Matsui, Yasutomo Segawa,* and Kenichiro Itami*
    J. Am. Chem. Soc. 136, 16452−16458 (2014)
    DOI: 10.1021/ja509880v

  19. Stereodivergent Synthesis of Arylcyclopropylamines by Sequential C-H Borylation and Suzuki-Miyaura Coupling
    Shin Miyamura, Misaho Araki, Takayoshi Suzuki, Junichiro Yamaguchi,* and Kenichiro Itami*
    Angew. Chem. Int. Ed. 54, 846 –851 (2015)
    DOI: 10.1002/anie.201409186

  20. Palladium-Catalyzed Asymmetric [3 + 2] Cycloaddition of 5‑Vinyloxazolidinones with Imines Using Chiral Ammonium-Phosphine Hybrid Ligand
    Kohsuke Ohmatsu, Shinya Kawai, Naomichi Imagawa, and Takashi Ooi*
    ACS Catal. 4, 4304−4306 (2014)
    DOI: 10.1021/cs501369z

  21. Selective functionalization of the mesopores of SBA-15
    Jonathan D. Webb, Tomohiro Seki, Jennifer F. Goldston, Marek Pruski, Cathleen M. Crudden
    Micro. Meso. Mater. 203, 123-131 (2015)
    DOI: 10.1016/j.micromeso.2014.10.032

  22. Chiral Ammonium Betaine-Catalyzed Highly Stereoselective Aza-Henry Reaction of a-Aryl Nitromethanes with Aromatic N-Boc Imines
    Daisuke Uraguchi, Keigo Oyaizu, Haruhiro Noguchi, and Takashi Ooi*
    Chem. Asian J. 10, 334 – 337 (2015)
    DOI: 10.1002/asia.201402943

  23. Dynamic F-actin movement is essential for fertilization in Arabidopsis thaliana
    Tomokazu Kawashima, Daisuke Maruyama, Murat Shagirov, Jing Li, Yuki Hamamura, Ramesh Yelagandula, Yusuke Toyama, Frédéric Berger
    eLife 3, e04501 (2014)
    DOI: 10.7554/eLife.04501

  24. New chemistries for chemoselective peptide ligations and the total synthesis of proteins
    Thibault JR Harmand, Claudia E Murar, Jeffrey W Bode
    Curr. Opin. Chem. Biol. 22, 115–121 (2014)
    DOI: 10.1016/j.cbpa.2014.09.032

  25. A dual-color marker system for in vivo visualization of cell cycle progression in Arabidopsis
    Ke Yin, Minako Ueda, Hitomi Takagi, Takehiro Kajihara, Shiori Sugamata Aki, Takashi Nobusawa, Chikage Umeda-Hara and Masaaki Umeda*
    The Plant Journal 80, 541–552 (2014)
    DOI: 10.1111/tpj.12652

  26. Chirality in Ordered Porous Organosilica Hybrid Materials
    Michael W. A. MacLean, Lacey M. Reid, Xiaowei Wu, and Cathleen M. Crudden*
    Chem. Asian J. 10, 70–82 (2015)
    DOI: 10.1002/asia.201402682

  27. Key Mechanistic Features of Ni-catalyzed C-H/C-O Biaryl Coupling of Azoles and Naphthalen-2-yl Pivalates
    Huiying Xu, Kei Muto, Junichiro Yamaguchi, Cunyuan Zhao, Djamaladdin G Musaev, and Kenichiro Itami
    J. Am. Chem. Soc. 136, 14834−14844 (2014)
    DOI: 10.1021/ja5071174

  28. Synthesis of Extended p-Systems through C-H Activation
    Yasutomo Segawa,* Takehisa Maekawa, and Kenichiro Itami*
    Angew. Chem. Int. Ed. 54, 66–81 (2015)
    DOI: 10.1002/anie.201403729

  29. Density-Functional Tight-Binding Combined with the Fragment Molecular Orbital Method
    Yoshio Nishimoto, Dmitri G. Fedorov,* and Stephan Irle*
    J. Chem. Theory Comput. 10, 4801−4812 (2014)
    DOI: 10.1021/ct500489d

  30. Traceless Preparation of C-Terminal a-Ketoacids for Chemical Protein Synthesis by a-Ketoacid-Hydroxylamine Ligation: Synthesis of SUMO2/3**
    Thomas G.Wucherpfennig, Vijaya R. Pattabiraman, Felix R. P. Limberg, Javier Ruiz-Rodr guez, and Jeffrey W. Bode*
    Angew. Chem. Int. Ed. 53, 12248 –12252 (2014)
    DOI: 10.1002/anie.201407014

  31. Formation and Rearrangement of Homoserine Depsipeptides and Depsiproteins in the a-Ketoacid-Hydroxylamine Ligation with 5-Oxaproline
    Thomas G. Wucherpfennig, Florian Rohrbacher, Vijaya R. Pattabiraman, and Jeffrey W. Bode*
    Angew. Chem. Int. Ed. 53, 12244 –12247 (2014)
    DOI: 10.1002/anie.201406097

  32. Live cell off-target identification of lapatinib using ligand-directed tosyl chemistry
    Kei Yamaura, Keiko Kuwata, Tomonori Tamura, Yoshiyuki Kioi, Yousuke Takaoka, Shigeki Kiyonaka and Itaru Hamachi*
    Chem. Commun., 50, 14097-14100 (2014)
    DOI: 10.1039/c4cc05885b

  33. Different Sets of ER-Resident J-Proteins Regulate Distinct Polar Nuclear-Membrane Fusion Events in Arabidopsis thaliana
    Daisuke Maruyama, Masaya Yamamoto, Toshiya Endo and Shuh-ichi Nishikawa*
    Plant Cell Physiol. 55, 1937–1944 (2014)
    DOI: 10.1093/pcp/pcu120

  34. Chiral Periodic Mesoporous Organosilicas: Probing Chiral Induction in the Solid State
    Michael W. A. MacLean, Thomas K. Wood, Gang Wu, Robert P. Lemieux, and Cathleen M. Crudden*
    Chem. Mater. 26, 5852−5859 (2014)
    DOI: 10.1021/cm501826b

  35. Enantioselective protonation of a-hetero carboxylic acid-derived ketene disilyl acetals under chiral ionic Brønsted acid catalysis
    Daisuke Uraguchi, Tomohito Kizu, Yuki Ohira and Takashi Ooi*
    Chem. Commun. 50, 13489-13491 (2014)
    DOI: 10.1039/c4cc06081d

  36. Multiple Roles of the Plasma Membrane H+-ATPase and Its Regulation
    Yin Wang*, Ken-ichiro Shimazaki, Toshinori Kinoshita
    The Enzymes, 35, 191–211 (2014)
    DOI: 10.1016/B978-0-12-801922-1.00008-7

  37. Critical interpretation of CH- and OH- stretching regions for infrared spectra of methanol clusters (CH3OH) n (n = 2-5) using self-consistent-charge density functional tight-binding molecular dynamics simulations
    Yoshifumi Nishimura, Yuan-Pern Lee, Stephan Irle, and Henryk A. Witek
    J. Chem. Phys. 141, 94303 (2014)
    DOI: 10.1063/1.4893952

  38. Synthetic fermentation of bioactive non-ribosomal peptides without organisms, enzymes or reagents
    Yi-Lin Huang and Jeffrey W. Bode
    Nat. Chem. 6, 877-884 (2014)
    DOI: 10.138/nchem.2048

  39. Direct evidence of active and inactive phases of Fe catalyst nanoparticles for carbon nanotube formation
    Stefano Mazzucco, Ying Wang, Mihaela Tanase, Matthieu Picher, Kai Li, Zhijian Wu, Stephan Irle, Renu Sharma
    Journal of Catalysis 319, 54–60 (2014)
    DOI: 10.1016/j.jcat.2014.07.023

  40. β‑Selective C−H Arylation of Pyrroles Leading to Concise Syntheses of Lamellarins C and I
    Kirika Ueda, Kazuma Amaike, Richard M. Maceiczyk, Kenichiro Itami,* and Junichiro Yamaguchi*
    J. Am. Chem. Soc. 136, 13226−13232 (2014)
    DOI: 10.1021/ja508449y

  41. Molecular Simulation of Water and Hydration Effects in Different Environments: Challenges and Developments for DFTB Based Models
    Puja Goyal, Hu-Jun Qian, Stephan Irle, Xiya Lu, Daniel Roston, Toshifumi Mori, Marcus Elstner, and Qiang Cui*
    J. Phys. Chem. B 118, 11007−11027 (2014)
    DOI: 10.1021/jp503372v

  42. Photodissociation of B−N Lewis Adducts: A Partially Fused Trinaphthylborane with Dual Fluorescence
    Kyohei Matsuo, Shohei Saito, and Shigehiro Yamaguchi*
    J. Am. Chem. Soc. 136, 12580−12583 (2014)
    DOI: 10.1021/ja506980p

  43. Mg-chelatase I subunit 1 and Mg-protoporphyrin IX methyltransferase affect the stomatal aperture in Arabidopsis thaliana
    Masakazu Tomiyama, Shin-ichiro Inoue, Tomo Tsuzuki, Midori Soda, Sayuri Morimoto, Yukiko Okigaki, Takaya Ohishi, Nobuyoshi Mochizuki, Koji Takahashi, Toshinori Kinoshita
    J Plant Res 127, 553–563 (2014)
    DOI: 10.1007/s10265-014-0636-0

  44. Live imaging of calcium spikes during double fertilization in Arabidopsis
    Yuki Hamamura, Moe Nishimaki, Hidenori Takeuchi, Anja Geitmann, Daisuke Kurihara & Tetsuya Higashiyama
    Nature Communications 5, Article number:4722, 1-9 (2014)
    DOI: 10.1038/ncomms5722

  45. LDAI-Based Chemical Labeling of Intact Membrane Proteins and Its Pulse-Chase Analysis under Live Cell Conditions
    Takayuki Miki, Sho-hei Fujishima, Kazuhiro Komatsu, Keiko Kuwata, Shigeki Kiyonaka, and Itaru Hamachi*
    Chemistry & Biology 21, 1013–1022 (2014)
    DOI: 10.1016/j.chembiol.2014.07.013

  46. Quantum Dynamics Simulations Reveal Vibronic Effects on the Optical Properties of [n]Cycloparaphenylenes
    V. Sivaranjana Reddy,* Cristopher Camacho, Jianlong Xia, Ramesh Jasti, and Stephan Irle*
    J. Chem. Theory Comput. 10, 4025−4036 (2014)
    DOI: 10.1021/ct500524y

  47. Elucidating the structural basis of diphenyl ether derivatives as highly potent enoyl-ACP reductase inhibitors through molecular dynamics simulations and 3D-QSAR study
    Pharit Kamsri, Auradee Punkvang, Patchareenart Saparpakorn, Supa Hannongbua, Stephan Irle, Pornpan Pungpo
    J Mol Model 20, 2319 (2014)
    DOI: 10.1007/s00894-014-2319-0

  48. Branch-Selective Allylic C−H Carboxylation of Terminal Alkenes by Pd/sox Catalyst
    Hiroki Kondo, Feng Yu, Junichiro Yamaguchi, Guosheng Liu,* and Kenichiro Itami*
    Org. Lett. 16, 4212−4215 (2014)
    DOI: 10.1021/ol5019135

  49. Highly selective directed arylation reactions via back-to-back dehydrogenative C-H borylation/arylation reactions
    Eric C. Keske, Brandon D. Moore, Olena V. Zenkina, Ruiyao Wang, Gabriele Schatte and Cathleen M. Crudden*
    Chem. Commun., 50, 9883 (2014)
    DOI: 10.1039/c4cc02499k

  50. Intrinsic photosensitivity of a deep brain photoreceptor
    Yusuke Nakane, Tsuyoshi Shimmura, Hideki Abe and Takashi Yoshimura
    Curr Biol 24, R596-597 (2014)
    DOI: 10.1016/j.cub.2014.05.038

  51. A Strap Strategy for Construction of an Excited-State Intramolecular Proton Transfer (ESIPT) System with Dual Fluorescence
    Naoya Suzuki, Aiko Fukazawa, Kazuhiko Nagura, Shohei Saito, Hirotaka Kitoh-Nishioka, Daisuke Yokogawa, Stephan Irle,* and Shigehiro Yamaguchi*
    Angew. Chem. Int. Ed. 53, 8231–8235 (2014)
    DOI: 10.1002/anie.201404867

  52. Super-Reduced Polyoxometalates: Excellent Molecular Cluster Battery Components and Semipermeable Molecular Capacitors
    Yoshio Nishimoto, Daisuke Yokogawa, Hirofumi Yoshikawa, Kunio Awaga, and Stephan Irle*
    J. Am. Chem. Soc. 136, 9042−9052 (2014)
    DOI: 10.1021/ja5032369

  53. An EAR-Dependent Regulatory Module Promotes Male Germ Cell Division and Sperm Fertility in Arabidopsis
    Michael Borg, Nicholas Rutley, Sateesh Kagale, Yuki Hamamura, Mihai Gherghinoiu, Sanjeev Kumar, Ugur Sari, Manuel A. Esparza-Franco, Wataru Sakamoto, Kevin Rozwadowski, Tetsuya Higashiyama, and David Twell
    The Plant Cell, 26, 2098–2113 (2014)
    DOI: 10.1105/tpc.114.124743

  54. Theoretical study of cellobiose hydrolysis to glucose in ionic liquids
    Yoshifumi Nishimura, Daisuke Yokogawa, Stephan Irle
    Chemical Physics Letters 603, 7–12 (2014)
    DOI: 10.1016/j.cplett.2014.04.014

  55. Dearomatization-Induced Transannular Cyclization: Synthesis of Electron-Accepting Thiophene‑S,S‑Dioxide-Fused Biphenylene
    Aiko Fukazawa,* Hiroya Oshima, Soji Shimizu, Nagao Kobayashi, and Shigehiro Yamaguchi*
    J. Am. Chem. Soc. 136, 8738−8745 (2014)
    DOI: 10.1021/ja503499n

  56. Heterotriangulenes π‑Expanded at Bridging Positions
    Chih-Ming Chou, Shohei Saito, and Shigehiro Yamaguchi*
    Org. Lett. 16, 2868−2871 (2014)
    DOI: 10.1021/ol501004g

  57. Universality and diversity in the signal transduction pathway that regulates seasonal reproduction in vertebrates
    Yusuke Nakane and Takashi Yoshimura
    Front. Neurosci. 8, 115 (2014)
    DOI: 10.3389/fnins.2014.00115

  58. Nickel-Catalyzed α-Arylation of Ketones with Phenol Derivatives
    Ryosuke Takise, Kei Muto, Junichiro Yamaguchi,* and Kenichiro Itami*
    Angew. Chem. Int. Ed. 53, 6791-6794 (2014)
    DOI: 10.1002/anie.201403823

  59. In situ generation of ion-paired chiral ligands: rapid identification of the optimal ligand for palladiumcatalyzed asymmetric allylation
    Kohsuke Ohmatsu, Yoshiyuki Hara and Takashi Ooi*
    Chem. Sci., 5, 3645–3650 (2014)
    DOI: 10.1039/c4sc01032a

  60. Plant signaling: Abscisic acid receptor hole-in-one
    Ken-ichiro Hayashi, Toshinori Kinoshita
    Nature Chemical Biology 10, 414–415 (2014)
    DOI: 10.1038/nchembio.1529

  61. Graphene nucleation on a surface-molten copper catalyst: quantum chemical molecular dynamics simulations
    Hai-Bei Li, Alister J. Page,* Christian Hettich, B´alint Aradi, Christof K¨ohler, Thomas Frauenheim, Stephan Irle* and Keiji Morokuma*
    Chem. Sci., 5, 3493 (2014)
    DOI: 10.1039/c4sc00491d

  62. A "Catch-and-Release" Protocol for Alkyne-Tagged Molecules Based on a Resin-Bound Cobalt Complex for Peptide Enrichment in Aqueous Media
    Ayako Miyazaki, Miwako Asanuma, Kosuke Dodo, Hiromichi Egami, and Mikiko Sodeoka*
    Chem. Eur. J. 20, 8116–8128 (2014)
    DOI: 10.1002/chem.201400056

  63. Poly(dimethylsiloxane)-based microdevices for studying plant reproduction
    Hideyuki Arata* and Tetsuya Higashiyama*
    Biochemical Society Transactions 42, 320-324 (2014)
    DOI: 10.1042/BST20130258

  64. Two-Dimensional Tetrathiafulvalene Covalent Organic Frameworks: Towards Latticed Conductive Organic Salts
    Shangbin Jin, Tsuneaki Sakurai, Tim Kowalczyk, Sasanka Dalapati, Fei Xu, Hao Wei, Xiong Chen, Jia Gao, Shu Seki, Stephan Irle, and Donglin Jiang*
    Chem. Eur. J. 20, 14608–14613 (2014)
    DOI: 10.1002/chem.201402844

  65. Hoechst tagging: a modular strategy to design synthetic fluorescent probes for live-cell nucleus imaging
    Akinobu Nakamura, Kazumasa Takigawa, Yasutaka Kurishita, Keiko Kuwata, Manabu Ishida, Yasushi Shimoda, Itaru Hamachi* and Shinya Tsukiji*
    Chem. Commun., 50, 6149-6152 (2014)
    DOI: 10.1039/c4cc01753f

  66. Theoretical investigation of molecular and electronic structure changes of the molecular magnet Mn12 cluster upon super-reduction
    Yoshio Nishimoto, Hirofumi Yoshikawa, Kunio Awaga, Marcus Lundberg*, and Stephan Irle*
    Phys. Status Solidi RRL 8, 517–521 (2014)
    DOI: 10.1002/pssr.201409094

  67. Growth assay of individual pollen tubes arrayed by microchannel device
    Mitsuhiro Horade, Naoki Yanagisawa, Yoko Mizuta, Tetsuya Higashiyama, Hideyuki Arata
    Microelectronic Engineering 118, 25–28 (2014)
    DOI: 10.1016/j.mee.2014.01.017

  68. Asymmetric Alkylation of α-Cyanosulfones Catalyzed by Chiral 1,2,3-Triazolium Salts
    Kohsuke Ohmatsu, Yusuke Hakamata, Ayano Goto, and Takashi Ooi*
    Heterocycles 88, 1661-1666 (2014)
    DOI: 10.3987/COM-13-S(S)121

  69. Nonequilibrium quantum chemical molecular dynamics simulations of C60 to SiC heterofullerene conversion
    Chatchawal Wongchoosuk, Ying Wang, Teerakiat Kerdcharoen, Stephan Irle*
    Carbon 68, 285-295 (2014)
    DOI: 10.1016/j.carbon.2013.11.003

  70. Graphene Nucleation from Amorphous Nickel Carbides: QM/MD Studies on the Role of Subsurface Carbon Density
    Meng-Gai Jiao, Hu-Jun Qian, Alister James Page, Kai Li, Ying Wang, Zhijian Wu, Stephan Irle, and Keiji Morokuma
    J. Phys. Chem. C 118, 11078−11084 (2014)
    DOI: 10.1021/jp4123612

  71. 2,4- and 2,5-Disubstituted Arylthiazoles: Rapid Synthesis by C-H Coupling and Biological Evaluation
    Lilia Lohrey, Takahiro N. Uehara, Satoshi Tani, Junichiro Yamaguchi,* Hans-Ulrich Humpf,* and Kenichiro Itami*
    Eur. J. Org. Chem. 2014, 3387–3394 (2014)
    DOI: 10.1002/ejoc.201402129

  72. The LNK1 night light-inducible and clock-regulated gene is induced also in response to warm-night through the circadian clock nighttime repressor in Arabidopsis thaliana
    Takeshi Mizuno, Aya Takeuchi, Yuji Nomoto, Norihito Nakamichi & Takafumi Yamashino
    Plant Signaling & Behavior 9, e28505 (2014)
    DOI: 10.4161/psb.28505

  73. Synthesis and Dimerization of Chloro[10]cycloparaphenylene: A Directly Connected Cycloparaphenylene Dimer
    Yuuki Ishii, Sanae Matsuura, Yasutomo Segawa, and Kenichiro Itami*
    Org. Lett. 16, 2174−2176 (2014)
    DOI: 10.1021/ol500643c

  74. Exciton recombination dynamics in nanoring cycloparaphenylenes
    Taishi Nishihara, Yasutomo Segawa, Kenichiro Itami and Yoshihiko Kanemitsu*
    Chem. Sci., 5, 2293–2296 (2014)
    DOI: 10.1039/c3sc53462f

  75. Spatial distribution of the RABBIT EARS protein and effects of its ectopic expression in Arabidopsis thaliana flowers
    Seiji Takeda, Mariko Noguchi, Yuki Hamamura, Tetsuya Higashiyama
    Planta 239, 707–715 (2014)
    DOI: 10.1007/s00425-013-2010-1

  76. Ca2+-Activated Reactive Oxygen Species Production by Arabidopsis RbohH and RbohJ Is Essential for Proper Pollen Tube Tip Growth
    Hidetaka Kaya, Ryo Nakajima, Megumi Iwano, Masahiro M. Kanaoka, Sachie Kimura, Seiji Takeda, Tomoko Kawarazaki, Eriko Senzaki, Yuki Hamamura, Tetsuya Higashiyama, Seiji Takayama, Mitsutomo Abe, and Kazuyuki Kuchitsu
    Plant Cell, 26, 1069-1080 (2014)
    DOI: 10.​1105/​tpc.​113.​120642

  77. Synthesis of Enantiomerically Enriched Triarylmethanes by Enantiospecific Suzuki−Miyaura Cross-Coupling Reactions
    Smitha C. Matthew, Ben W. Glasspoole, Patrick Eisenberger, and Cathleen M. Crudden*
    J. Am. Chem. Soc. 136, 5828−5831 (2014)
    DOI: 10.1021/ja412159g

  78. Programmed synthesis of arylthiazoles through sequential C-H couplings
    Satoshi Tani, Takahiro N. Uehara, Junichiro Yamaguchi and Kenichiro Itami*
    Chem. Sci., 5, 123–135 (2014)
    DOI: 10.1039/c3sc52199k

  79. Ultra stable self-assembled monolayers of N-heterocyclic carbenes on gold
    Cathleen M. Crudden*, J. Hugh Horton*, Iraklii I. Ebralidze, Olena V. Zenkina, Alastair B. McLean, Benedict Drevniok, Zhe She, Heinz-Bernhard Kraatz, Nicholas J. Mosey, Tomohiro Seki, Eric C. Keske, Joanna D. Leake, Alexander Rousina-Webb and Gang Wu
    Nature Chem. 6, 409-414 (2014)
    DOI: 10.1038/nchem.1891

  80. Antisense gene inhibition by phosphorothioate antisense oligonucleotide in Arabidopsis pollen tubes
    Yoko Mizuta,* and Tetsuya Higashiyama
    The Plant Journal 78, 516–526 (2014)
    DOI: 10.1111/tpj.12461

  81. Exchange of ADP with ATP in the CII ATPase domain promotes autophosphorylation of cyanobacterial clock protein KaiC
    Taeko Nishiwaki-Ohkawa, Yohko Kitayama, Erika Ochiai, and Takao Kondo
    PNAS 111, 4455-4460 (2014)
    DOI: 10.1073/pnas.1319353111

  82. Manganese-catalyzed intermolecular C-H/C-H coupling of carbonyls and heteroarenes
    Keika Hattori, Asraa Ziadi, Kenichiro Itami and Junichiro Yamaguchi*
    Chem. Commun., 50, 4105-4107 (2014)
    DOI: 10.1039/c4cc01376j

  83. "Late-Stage C−H Coupling Enables Rapid Identification of HDAC Inhibitors: Synthesis and Evaluation of NCH-31 Analogues"
    Hiromi Sekizawa, Kazuma Amaike, Yukihiro Itoh, Takayoshi Suzuki,* Kenichiro Itami,*and Junichiro Yamaguchi*
    ACS Med. Chem. Lett. 5, 582−586 (2014)
    DOI: 10.1021/ml500024s

  84. Catalytic asymmetric Payne oxidation under the catalysis of P-spiro chiral triaminoiminophosphorane: application to the synthesis of N-sulfonyl oxaziridines
    Daisuke Uraguchi, Ryosuke Tsutsumi, Takashi Ooi*
    Tetrahedron 2014, 70, 1691-1701
    DOI: 10.1016/j.tet.2013.12.086

  85. Size-Selective Complexation and Extraction of Endohedral Metallofullerenes with Cycloparaphenylene
    Yusuke Nakanishi, Haruka Omachi, Sanae Matsuura, Yasumitsu Miyata, Ryo Kitaura, Yasutomo Segawa, Kenichiro Itami,* and Hisanori Shinohara*
    Angew. Chem. Int. Ed. 53, 3102–3106 (2014)
    DOI: 10.1002/anie.201311268

  86. The Practical Preparation of Chiral N-Sulfonyl Oxaziridines via Catalytic Asymmetric Payne Oxidation Asymmetric Payne Oxidation
    Ryosuke Tsutsumi, Seonwoo Kim, Daisuke Uraguchi, Takashi Ooi*
    Synthesis 46, 871–878 (2014)
    DOI: 10.1055/s-0033-1340818

  87. Development of the crosslinking reactions to RNA triggered by oxidation
    Shuhei Kusano, Takuya Haruyama, Shogo Ishiyama, Shinya Hagihara and Fumi Nagatsugi*
    Chem. Commun., 50, 3951-3954 (2014)
    DOI: 10.1039/c3cc49463b

  88. Growth mechanisms and selectivity for graphene or carbon nanotube formation on SiC (0001): A density-functional tight-binding molecular dynamics study
    Noriyuki Ogasawara, Wataru Norimatsu, Stephan Irle, Michiko Kusunoki
    Chemical Physics Letters 595–596, 266–271 (2014)
    DOI: 10.1016/j.cplett.2014.02.019

  89. Synthesis of Pyridine N-Oxide-BF2CF3 Complexes and Their Fluorescence Properties
    Tomoaki Nishida, Aiko Fukazawa, Eriko Yamaguchi, Hiroya Oshima, Shigehiro Yamaguchi, Motomu Kanai,* and Yoichiro Kuninobu*
    Chem. Asian J. 9, 1026–1030 (2014)
    DOI: 10.1002/asia.201301688

  90. Enantioselective formal a-allylation of nitroalkanes through a chiral iminophosphoranecatalyzed Michael reaction-Julia-Kocienski olefination sequence
    Daisuke Uraguchi, Shinji Nakamura, Hitoshi Sasaki, Yuki Konakade and Takashi Ooi*
    Chem. Commun., 50, 3491-3493 (2014)
    DOI: 10.1039/c3cc49477b

  91. Abscisic Acid Suppresses Hypocotyl Elongation by Dephosphorylating Plasma Membrane H+-ATPase in Arabidopsis thaliana
    Yuki Hayashi, Koji Takahashi, Shin-ichiro Inoue and Toshinori Kinoshita*
    Plant Cell Physiol. 55, 845–853 (2014)
    DOI: 10.1093/pcp/pcu028

  92. Multiple BiP Genes of Arabidopsis thaliana are Required for Male Gametogenesis and Pollen Competitiveness
    Daisuke Maruyama, Tomoyuki Sugiyama, Toshiya Endo and Shuh-ichi Nishikawa*
    Plant Cell Physiol. 55, 801–810 (2014)
    DOI: 10.1093/pcp/pcu018

  93. Intersubunit communications within KaiC hexamers contribute the robust rhythmicity of the cyanobacterial circadian clock
    Yohko Kitayama,* Taeko Nishiwaki-Ohkawa and Takao Kondo
    Microbial Cell 1, 67-69 (2014)

  94. Regulation of seasonal reproduction by hypothalamic activation of thyroid hormone
    Ai Shinomiya,Tsuyoshi Shimmura,Taeko Nishiwaki-Ohkawa and Takashi Yoshimura*
    Frontiers in Neuroendocrinology 2014, 5, 12, 1-7
    DOI: 10.3389/fendo.2014.00012

  95. Quantum chemical simulations reveal acetylene-based growth mechanisms in the chemical vapor deposition synthesis of carbon nanotubes
    Ying Wang, Xingfa Gao, Hu-Jun Qian, Yasuhito Ohta, Xiaona Wu, Gyula Eres, Keiji Morokuma*, Stephan Irle*
    Carbon 72, 22-34 (2014)
    DOI: 10.1016/j.carbon.2014.01.020

  96. Hybridization of a Flexible Cyclooctatetraene Core and Rigid Aceneimide Wings for Multiluminescent Flapping p Systems
    Chunxue Yuan, Shohei Saito,* Cristopher Camacho, Tim Kowalczyk, Stephan Irle,* and Shigehiro Yamaguchi*
    Chem. Eur. J. 20, 2193–2200 (2014)
    DOI: 10.1002/chem.201303955

  97. Step-edge self-assembly during graphene nucleation on a nickel surface: QM/MD simulations
    Ying Wang, Alister J. Page, Hai-Bei Li, Hu-Jun Qian, Meng-gai Jiao, Zhi-Jian Wu, Keiji Morokuma* and Stephan Irle*
    Nanoscale, 6, 140-144 (2014)
    DOI: 10.1039/c3nr04694j

  98. Modular Synthesis of Triarylmethanes through Palladium-Catalyzed Sequential Arylation of Methyl Phenyl Sulfone
    Masakazu Nambo* and Cathleen M. Crudden*
    Angew. Chem. Int. Ed. 53, 742 –746 (2014)
    DOI: 10.1002/anie.201307019

  99. Catalytic covalent organic frameworks via pore surface engineering
    Hong Xu, Xiong Chen, Jia Gao, Jianbin Lin, Matthew Addicoat, Stephan Irle and Donglin Jiang*
    Chem. Commun., 50, 1292-1294 (2014)
    DOI: 10.1039/c3cc48813f

  100. Overexpression of plasma membrane H+-ATPase in guard cells promotes light-induced stomatal opening and enhances plant growth
    Yin Wang, Ko Noguchi, Natsuko Ono, Shin-ichiro Inoue, Ichiro Terashima, and Toshinori Kinoshita
    PNAS 111, 533-538 (2014)
    DOI: 10.1073/pnas.1305438111

  101. Ligand-enabled multiple absolute stereocontrol in metal-catalysed cycloaddition for construction of contiguous all-carbon quaternary stereocentres
    Kohsuke Ohmatsu, Naomichi Imagawa and Takashi Ooi*
    Nature Chem. 6, 47–51 (2014)
    DOI: 10.1038/nchem.1796

  102. Synthesis and properties of cycloparaphenylene-2,7-pyrenylene: a pyrene-containing carbon nanoring
    Akiko Yagi, Gandikota Venkataramana, Yasutomo Segawa and Kenichiro Itami*
    Chem. Commun., 50, 957-959 (2014)
    DOI: 10.1039/c3cc48198k

  103. Selective synthesis of [7]- and [8]cycloparaphenylenes
    Friederike Sibbel, Katsuma Matsui, Yasutomo Segawa, Armido Studer and Kenichiro Itami*
    Chem. Commun., 50, 954-956 (2014)
    DOI: 10.1039/c3cc48683d

  104. Constraint-induced structural deformation of planarized triphenylboranes in the excited state
    Tomokatsu Kushida, Cristopher Camacho, Ayumi Shuto, Stephan Irle,* Masayasu Muramatsu, Tetsuro Katayama, Syoji Ito, Yutaka Nagasawa, Hiroshi Miyasaka,* Eri Sakuda, Noboru Kitamura, Zhiguo Zhou, Atsushi Wakamiya and Shigehiro Yamaguchi*
    Chem. Sci., 5, 1296 (2014)
    DOI: 10.1039/c3sc52751d

  105. Synthesis of dihydrobenzo[b]furans by diastereoselective acyloxyarylation.
    Kazuhiro Hata, Zhiheng He, Constantin Gabriel Daniliuc, Kenichiro Itami* and Armido Studer*
    Chem. Commun., 50, 463-465 (2014)
    DOI: 10.1039/c3cc47350c

  106. Diverse modifications of the 4-methylphenyl moiety of TAK-779 by late-stage Suzuki-Miyaura cross-coupling
    Anna Junker, Dirk Schepmann, Junichiro Yamaguchi, Kenichiro Itami, Andreas Faust, Klaus Kopka, Stefan Wagner and Bernhard Wünsch*
    Org. Biomol. Chem., 12, 177–186 (2014)
    DOI: 10.1039/c3ob41873a

  107. Step-edge self-assembly during graphene nucleation on a nickel surface: QM/MD simulations
    Ying Wang, Alister J. Page, Hai-Bei Li, Hu-Jun Qian, Meng-gai Jiao, Zhi-Jian Wu, Keiji Morokuma* and Stephan Irle*
    Nanoscale 6, 140-144 (2014)
    DOI: 10.1039/c3nr04694j

  108. Fabrication of microcage arrays to fix plant ovules for long-term live imaging and observation
    Jongho Park∗, Daisuke Kurihara, Tetsuya Higashiyama, Hideyuki Arata
    Sensors and Actuators B 191, 178–185 (2014)
    DOI: 10.1016/j.snb.2013.09.060

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